Say goodbye to crumbly, flimsy, or just plain dry and bland pizza bases. This gluten free sourdough discard pizza crust recipe bakes up golden brown with the exact chewiness you expect from a great slice. It is the ultimate low FODMAP dinner for anyone managing food sensitivities. You can make the gluten free pizza dough ahead of time and customize it as a thick crust or thin crust. Top it with fresh homemade tomato pizza sauce and dairy free cheese for a comforting meal that makes you forget you are even eating gluten free. This pizza dough can be made ahead and makes 2 12" thin crust pizzas or 1 14" thick crust pizza. Either way you slice it, this is going to be a new low FODMAP dinner favorite!

Missing a truly good slice of pizza is a common struggle when you eat gluten free. Store bought crusts are often thin like cardboard or fall apart the second you pick them up. As someone who has been eating gluten free for over 5 years now, making a tasty and easy gluten free pizza recipe was one of the top recipes I needed to make for myself (and you!). After a few tries, this pizza crust was perfected. The sourdough discard gives it a deep flavor that regular gluten free doughs just lack. It ferments beautifully and bakes up into a sturdy base for any topping you love. I usually serve it alongside a fresh salad, but it also pairs perfectly with other favorites. If you want to switch up the flavors, try topping it with my Low FODMAP Kale Pesto Sauce.
This gluten free sourdough discard pizza crust recipe is going to quickly become your new favorite way to use up your gluten free sourdough discard. This gluten free sourdough discard pizza crust is everything you want in a slice. It is chewy, crispy on the edges, and holds its shape perfectly. Best of all, it puts your extra starter to fantastic use. Whether you are a fan of thick crust or thin, you can make this gluten free sourdough discard pizza crust both ways to satisfy even the choosiest of pizza fans!
If you're looking for even more delicious gluten free pizza crust recipes, you can also check out this recipe for Grain Free Vegan Pizza Dough. It's a super simple recipe, yeast free, and makes a killer deep dish or thin crust pizza! And if you are looking for some refreshing cocktails to enjoy with your gluten free sourdough pizza, you will want to try this Black Walnut Old Fashioned, this Campari Tonic or my personal favorite, a Limoncello Martini!
Why You'll Love This Gluten Free Pizza Recipe
- It's a great way to use up your gluten free sourdough discard! I'm one of those people who makes gluten free sourdough starter simply for the discard. This sourdough pizza crust is one of my favorite ways to use it; I can customize the toppings to whatever I am craving that day and know that the sourdough pizza crust will always be a delicious foundation.
- You want to impress friends and family with your baking skills. Sure, this may be a vain reason, but you know you love to hear how great a cook you are. No one needs to know this crust is easier than regular yeast pizza crust (that can be our secret)!
- You're looking for a good gluten free version of pizza. Look, everyone loves a good pizza. But as someone who eats gluten free, you know that gluten free pizza crust is often not as delicious. This homemade gluten free pizza recipe is actually tasty and I'm not just saying that because it is my recipe.

Ingredients & Substitutions for Gluten Free Sourdough Pizza Crust
Gluten Free Sourdough Starter Discard: You will need gluten free sourdough discard in order to make this low FODMAP recipe. Make sure that your discard is unfed when using, meaning as you are going about feeding your gluten free sourdough starter, mix and remove 1 cup (this is the "discard") prior to feeding your starter as normal.
Gluten Free 1:1 Flour: This recipe works best with gluten free measure for measure flour, also known as 1:1 flour. I originally tested this recipe using King Arthur Gluten Free Measure for Measure flour, but it also will work with Bob's Red Mill or any other gluten free 1:1 flour. I have not tested this recipe using any other flours and it should be known that if you swap in a flour other than gluten free 1:1 measure for measure flour, like almond flour or coconut flour, I cannot guarantee that this gluten free sourdough discard pizza crust recipe will turn out.
Instant Yeast: I used Fleishmann's Instant Yeast in this recipe but if you are looking for a yeastless pizza crust option, you can try this Paleo Vegan Pizza Crust recipe instead!
Lukewarm Water: It is important for the water to be lukewarm in order to activate the yeast. Too hot of water will actually kill the yeast and your pizza crust will not rise properly.
Salt: Essential for flavoring the dough.
Homemade Tomato Pizza Sauce: The quick homemade pizza sauce uses plain tomato sauce, fire roasted diced tomatoes, fresh basil, oregano, thyme, salt, and pepper. It is naturally sweet and completely refined sugar free. If you are not a fan of tomato sauce, here are some other Low FODMAP sauces and toppings: Kale Pesto Sauce or Garlic Infused Olive Oil with mozzarella, parmesan, and Italian seasoning.
Homemade Sourdough Pizza Step by Step Instructions
- Prep Sourdough Discard. Stir any liquid on top of your starter back into it before measuring out 1 cup.
- Mix Ingredients. Add starter, water, flour, salt, and yeast to the bowl of a stand mixer and mix on low using a dough hook, about 7 minutes. You could also knead by hand if you do not have a mixer. You can easily mix this by hand. Use a sturdy wooden spoon to combine everything in a large bowl. Once it comes together, grease your hands with oil (so the dough doesn't stick to your hands) and turn it out onto the greased counter and knead it by hand for about 5 to 7 minutes.
- Proof Dough. Place the dough into a pre-greased bowl (I just used an olive oil spray) cover with a kitchen towel and allow dough to rise in a warm place until about doubled in bulk. This took about 2-3 hours for me and will depend on how active your discard is.
- Shape Dough. For a thin crust pizza, divide dough ball in half to make 2 12" pizzas or use the original dough ball to make one 14" thick crust pizza. I've tried it both ways and the thin crust is my favorite! Coat your fingers in olive oil before shaping; this keeps the sticky dough from clinging to you.
- Preheat. Preheat oven to 450 while you work the pizza dough.
- Prep Pan. If you have one, use a cast iron pizza pan coated with a little cornmeal for crispiest results. If not, grease a cookie sheet or pizza pan and work dough into a circle (or rectangle if using a cookie sheet)
- Make Sauce. Add all ingredients to a high speed blender, reserving about ¼ cup fire roasted tomatoes. Pulse until basil is chopped, then stir in reserved fire roasted tomato if you like a chunkier sauce.
- Oil Dough. Drizzle the dough with garlic infused olive oil and spread with a spoon.
- Add Sauce. Spread the homemade pizza sauce on top of the dough with the back of the spoon just like the oil (look at the notes for other sauce ideas if you are not a tomato sauce fan).
- Bake. Bake the dough for about 10 minutes prior to adding toppings
- Add Toppings. Add the cheese and whatever toppings you would like to add to your pizza to customize it for your liking.
- Bake Again. Bake again for another 10-12 minutes until cheese is fully melted and crust is beginning to reach a golden brown. Enjoy!
Expert Tips & Tricks
- Use a glass bowl for proofing. Yeast doesn't love metal bowls, so I found this glass bowl to be the best alternative. You can also use ceramic if you do not have glass.
- Use a stand mixer. I prefer to make this sourdough discard pizza crust using my stand mixer and dough hook as it is far easier to do this way, but you can absolutely use your hands to knead the dough if a stand mixer isn't something you have access to.
- Parbaking your crust is mandatory. Gluten free dough holds moisture differently. Baking the crust alone for 10 minutes prevents a soggy middle.
- Keep your hands oiled. If you shape the dough by hand, coat your fingers in olive oil. This keeps the sticky dough from clinging to you.
Gluten Free Sourdough Pizza FAQs
Why did my dough not rise?
The most common culprit is old yeast or too hot of water. Make sure your instant yeast is fresh (within about 3 months of opening). Your water temperature also matters. If the water is too hot, it will kill the yeast; aim for about 100 degrees Fahrenheit. Rule of thumb is it should feel like warm bath water.
Is this recipe low FODMAP friendly?
Yes, I wrote this recipe to be a low FODMAP recipe actually. This sourdough pizza is very gut friendly. Using garlic infused olive oil gives you that rich garlic flavor without the stomach irritants. The sourdough fermentation process in the crust also helps break down the grains, making it much easier to digest.
What is the best dairy free cheese for this pizza?
Look for a vegan mozzarella style cheese that uses a coconut oil or cashew milk base. Brands like Violife or Miyoko's melt and bubble the best in a hot oven without getting rubbery. If you have a dairy free cheese brand you like better though, use it!
Can I make this without a stand mixer?
You can easily mix this by hand. Use a sturdy wooden spoon to combine everything in a large bowl. Once it comes together, grease your hands with oil (so the dough doesn't stick to your hands) and turn it out onto the greased counter and knead it by hand for about 5 to 7 minutes.
What is the best way to reheat leftovers?
You may think to use the microwave because it is convenient and fast, but trust me when I say, skip the microwave or the crust will get soggy. Reheat your pizza slices in a dry skillet over medium heat for 3 to 5 minutes. You can also pop them into an air fryer at 350 degrees Fahrenheit for 3-5 minutes to make the crust perfectly crispy again.
What is the best gluten free 1:1 flour to use for this recipe?
I originally tested this recipe using King Arthur Gluten Free Measure for Measure flour, but it also will work with Bob's Red Mill or any other gluten free 1:1 flour. I have not tested this recipe using any other flours and it should be known that if you swap in a flour other than gluten free 1:1 measure for measure flour, like almond flour or coconut flour, I cannot guarantee that this gluten free sourdough discard pizza crust recipe will turn out.

If You Liked This Sourdough Pizza Recipe, You'll Want To Try...
- Gluten free sourdough discard crackers
- Gluten Free Vegan Pizza Dough
- Gluten Free Neapolitan Pizza Dough (Low FODMAP Pizza Recipe)
- Cottage Cheese Pizza Bowl Single Serve High Protein
- 25+ Healthy Lunch Ideas High Protein, Gluten Free
Did you have a chance to make this recipe? If so, please leave me a rating and review below. I always love and appreciate hearing from you!

Gluten Free Sourdough Discard Pizza Crust
Equipment
- Scale
- Measuring Cups + Spoons
- Blender or Food Processor
Ingredients
For the Crust
- 1 cup (240 g) unfed gluten free sourdough starter
- ½ cup (118.3 g) lukewarm water
- 2 ½ cups gluten free 1:1 flour look at note for weight of flour*
- 1 tsp (6 g) salt
- 1 tsp (3 g) instant yeast
For the Sauce
- 1 can plain tomato sauce no spices, etc added
- 1 can fire roasted diced tomatoes
- 1 cup fresh basil , or 4 tsp. dried basil
- 1-2 tablespoon dried oregano
- 1 tablespoon dried thyme
- salt + pepper to taste
- 1 teaspoon red pepper flakes , optional
Instructions
For the Pizza Crust:
- Prep Sourdough Discard. Stir any liquid on top of your starter back into it before measuring out 1 cup.
- Mix Ingredients. Add starter, water, flour, salt, and yeast to the bowl of a stand mixer and mix on low using a dough hook, about 7 minutes. You could also knead by hand if you do not have a mixer.
- Proof Dough. Place the dough into a pre-greased bowl (I just used an olive oil spray) cover with a kitchen towel and allow dough to rise in a warm place until about doubled in bulk. This took about 2-3 hours for me and will depend on how active your discard is.
- Shape Dough. For a thin crust pizza, divide dough ball in half to make 2 12" pizzas or use the original dough ball to make one 14" thick crust pizza. I've tried it both ways and the thin crust is my favorite!
- Preheat. Pre-heat oven to 450 while you work the pizza dough.
- Prep Pan. If you have one, use a cast iron pizza pan coated with a little cornmeal for crispiest results. If not, grease a cookie sheet or pizza pan and work dough into a circle (or rectangle if using a cookie sheet)
For the Sauce:
- Make Sauce. Add all ingredients to a high speed blender, reserving about ¼ cup fire roasted tomatoes. Pulse until basil is chopped, then stir in reserved fire roasted tomato if you like a chunkier sauce.
Assemble Pizza:
- Oil Dough. Drizzle the dough with garlic infused olive oil and spread with a spoon.
- Add Sauce. Spread the homemade pizza sauce on top of the dough with the back of the spoon just like the oil (look at the notes for other sauce ideas if you are not a tomato sauce fan).
- Bake. Bake the dough for about 10 minutes prior to adding toppings
- Add Toppings. Add the cheese and whatever toppings you would like to add to your pizza to customize it for your liking.
- Bake Again. Bake again for another 10-12 minutes until cheese is fully melted and crust is beginning to reach a golden brown. Enjoy!
Video
Notes
- King Arthur Measure for Measure: 146 g
- Bob's Red Mill 1-to-1 Baking Flour: 148g
- Cup4Cup: 149 g
- Namaste Perfect Blend: 134 g
- Great Value (Walmart): 166 g
- Kale Pesto Sauce
- Garlic Infused Olive Oil with Mozzarella, Parmesan + Italian Seasoning
- Loaded Veggie Pizza
- Low FODMAP Pizza Sauce, in the recipe card above





Kathy says
This pizza crust is amazing! Please make more gf sourdough starter recipes!!!!
Pretty Delicious Life says
I am so happy to hear that! Don't worry, I'm working on it! Thank you so much, Kathy!
Chelsea says
This pizza dough looks incredible. I cant believe how easy it is to make. The length it takes to make pizza dough always ,makes me shy away from it, but I am diving full force into this quick, gut healthy dough!
Gabe says
As an italian, I am always looking for new pizza doughs. Thank you!
Marley says
This is so approachable and looks so delicious!!
Lizzie says
Hi there -
Could this be made & then worked into a ball and frozen? Then defrosted and prepared as mentioned above?
Thank you!
prettydeliciouslife says
Hi Lizzie! While I haven't tested this out with this particular recipe yet, in my experience working with gluten free doughs, I do not see why that would not work! I would just be sure to wrap it really well before freezing and give it ample time to defrost at room temp before using. You'll have to let me know how it turns out if you get the chance to try!
Christy Hoffman says
Hi! I was wondering what your hydration ratio is of your starter. My pizza did not rise and did not come out amazing, although nothing wrong with the flavor!! Is your starter 100% hydration? Also is it mature. I’m still growing my starter for bread baking, so curious if it’s due to the fact that my starter is not quite ready for baking bread. The flavor was terrific. Just no growth and the dough was very dense and a little dry. I kept adding water just to get it to come together. Thanks for sharing!
prettydeliciouslife says
Hi Christy! If my memory serves, the starter that I used was somewhere around 85% hydration. Do you recall what yours was? Do you know if your yeast was fresh? I haven't heard of anyone having issues that I'm aware of so if there's anything else I can help you troubleshoot I'm happy to do so, I want you to love your pizza! 🙂
Christy Hoffman says
Hi! Made this again — great tasting pizza! But just no rise. I think my yeast was old. So the next time I do this, I will buy fresh yeast and see if it makes a difference. My starter is 100% hydration, but I still struggled to incorporate all the flour, still a very dry dough. I’m chalking it up to differences in location, etc! Thank you for this recipe! I will keep tweaking slightly to see if I can figure out why mine is so dry… but we LOVE the taste! My daughter said ”this is the best one yet” tonight. I’m still new to the whole sourdough game, so it could be ,y lack of experience as well! Thanks so much for replying!
prettydeliciouslife says
I'm SO happy to hear you're loving the flavor at least! I'm willing to bet it's probably the yeast, but please continue to keep me posted on how it goes especially if you end up discovering something that could be helpful to others when it comes to troubleshooting. I've made this so many times with no issue so I'm really feeling like it's your yeast but want to help you nail it, so please keep me posted! Every detail helps! 🙂
Sherry says
Hi! Can we use discard for this? or does it need to be un-fed starter? thanks
prettydeliciouslife says
Hi! Yes you can use discard for this recipe 🙂
Sherry Van Grootheest says
Hi! I used discard, and only 2 cups of gf flour and it is sooo dry. I have had to add almost half a cup of extra water. When I feed my starter I do 1:1:1. Is that the problem? Thanks
prettydeliciouslife says
Hi there! Hmm, what brand of gf flour did you use? I find that the type of flour sometimes has more to do with it than the starter.
Jeanne says
can I use a large cast iron skillet vs a pizza pan? Should Ipreheat the cast iron before baking
prettydeliciouslife says
You can! This recipe will work as a deep dish pizza & it's not necessary to preheat the cast iron however you may want to parbake the crust before adding toppings to ensure it cooks all the way through.
Ruth says
Just started on my sourdough journey, and this pizza crust is to die for!!!! I added basil, rosemary, and garlic to the dough as it rose! I have a question could I make it a day in advance and put it in the fridge? Have you had any success with that or do you think it would rise again?
prettydeliciouslife says
Hi Ruth, I'm so glad you enjoyed this recipe and the added seasonings to the dough sound absolutely delicious! I have not tested letting the dough rest for a day in the fridge with this recipe but my gluten free Neapolitan pizza crust can be made in advance (it's just not a sourdough recipe)
Beth S. says
Can I use discard or does it have to be active starter?
prettydeliciouslife says
Hi Beth, you can use discard! 🙂